Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX251057: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-221837' containing sample 'Escherichia coli HVH 115 (4-4465989)'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.1M spots, 415.7M bases, 193.1Mb downloads

UUID: 59af85ab-818d-40ff-8e36-6fc12483a28f

Design: Illumina sequencing of Escherichia coli HVH 115 (4-4465989) via random selection

Submitted by: Broad Institute (BI)

Study: E coli UTI Bacteremia

PRJNA186137 • SRP019083 • All experiments • All runs

Sample: Pathogen bacterial, clinical or host-associated sample from Escherichia coli HVH 115 (4-4465989)

SAMN01885764 • SRS399627 • All experiments • All runs

Organism: Escherichia coli HVH 115 (4-4465989)

Library:

Name: Pond-221837

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 289744.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:3VHMT

material_type: DNA:DNA Somatic

product_order: PDO-291

product_part_number: P-MCV-0001

project: G30161

research_project: RP-192

root_sample_id: SM-2TCZH

sample_id: SM-3VHMT

work_request: 35112

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-03-08 22:34:25.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 1 run, 2.1M spots, 415.7M bases, 193.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR784021	2,057,825	415.7M	193.1Mb	2013-03-17

ID:: 350981

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